![[R logo]](../../../doc/html/logo.jpg){kind=logo}
![[Up]](../../../doc/html/left.jpg){kind=small}
![[Top]](../../../doc/html/up.jpg){kind=small}
| bioindic-package | bioindic-package |
| bioindic-package | bioindic-package |
| annts | transfer function using the bootstrap artificial neural networks |
| bestanal | bestanal |
| bestanal_NA | bestanal_NA |
| bioindic | bioindic-package |
| bioindic | bioindic-package |
| biomenu | biomenu |
| BPfilter | BPfilter |
| cartosurf | map a field on a map, as a surface or as points |
| cartosurfi | map a field on a map, as a surface and points, point size being proportional to their confidence |
| clim | clim data file |
| ClusKMeans | Clustering using kmeans technique |
| cospecfft | calculates FFT co-spectrum of a multivariate time-series |
| create.ar | create.ar |
| create.wgn | create.wgn |
| critical.valuesWCO | critical.valuesWCO |
| critical.valuesWSP | critical.valuesWSP |
| cwt.ts | cwt.ts |
| denIXargc | Tree-ring series standardization using the adaptative regional growth curve (ARGC) |
| denIXsm | Standardization of tree-ring series using a spline function |
| denRFcpb | Response function using a bootstrapped regression on CP |
| dentest | dentest |
| fospo | fospo data file |
| fospop | fospop datafile |
| fosrec | fosrec datafile |
| globclim | global climate datafile |
| inmatname | inmatname |
| linreg | stepwise linear regression |
| linregtst | linregtst |
| listdelDF | remove all the existing matrices from the workspace |
| listDF | lists the available matrices in the workspace |
| listsaveDF | saves all the available matrices in the workspace onto the working directory |
| makemat | reads a data file and transforms it in a matrix |
| master | master |
| MISmat | Missing data reconstruction by modern analogues method |
| nao | nao series |
| nnsens | nnsens |
| nrtable | generate a random numbers matrix |
| pca | Performs a principal component analysis with selected graphical outputs |
| percass | adapt a fossil data matrix to a modern data matrix |
| pft2biom | pft2biom |
| pftscores | calculates pft, biome scores and assigned biome to a matrix of assemblages |
| plot.coi | plot.coi |
| plot.cv | plot.cv |
| plot.marks | plot.marks |
| plot.wt | plot.wt |
| plotIntraInterKm | plotIntraInterKm |
| plotnoise | plotnoise |
| plot_timeser3 | plot reconstructed values with one or two confidence intervals and eventually observed values |
| predLDb | prediction by bootstrap linear discriminant analysis |
| predLMb | prediction by bootstrap linear regression |
| proxyeur | proxyeur |
| rawWSP | rawWSP |
| read.matrix | read.matrix |
| read.ts | read.ts |
| readRWL | read tree-ring files in Tucson (RWL) format |
| recANNb | transfer function using the bootstrap artificial neural networks |
| recGAM | transfer function using the GAM method |
| recGLM | transfer function using the GLM method |
| recIK | transfer function using the Imbrie & Kipp method |
| recMAT | transfer function using the modern analogue method, eventually with taxon weighting and/or categorial constraints |
| recPLS | transfer function using the PLS method |
| recWAPLS | transfer function using the WAPLS method |
| respSURF | 4-dim response surface of the environmental variables |
| rk | rk |
| smooth.matrix | smooth.matrix |
| sourceDir | sourceDir |
| splitdata | Split the input data matrices into calibration and verification matrices |
| splitdata2 | Split the input data matrices into calibration and verification matrices |
| ss700bm | ss700bm: surface pollen site biomes datafile |
| ss700cl | ss700cl: surface pollen site climate datafile |
| ss700co | ss700co: surface pollen site coordinates |
| ss700po | ss700po: surface pollen datafile |
| tax2pft | tax2pft: datafile to convert taxa to pft |
| WANA_reconstruction | WANA_reconstruction |
| wavecohsp | calculates FFT co-spectrum of a multivariate time-series |
| wavesp | calculates FFT co-spectrum of a multivariate time-series |
| WA_reconstruction | WA_reconstruction |
| wcoh | wcoh |
| wcsp | wcsp |
| wsp | wsp |
| wtcolors | wtcolors |